Scripts

The scripts folder contains helper functions to help install and initiate WAVI ensembles:

scripts
└── archer/jasmin
|   ├── fcopy_wavi_case_a2.sh # Unique to ARCHER2
|   ├── .. # Symlinks to BAS pre_run.sh and post_batch.sh
|   └── .. # Symlinks to local
└── jasmin
|   ├── .. # Symlinks to BAS pre_run.sh and post_batch.sh
|   └── .. # Symlinks to local
└── BAS
|   ├── install_julia.sh # Unique to BAS HPC
|   ├── post_batch.sh
|   ├── pre_run.sh
|   └── .. # Symlinks to local
└── local
|   ├── wavi_create_case
|   ├── wavi_ensemble
|   ├── wavi_execute
|   └── wavi_install
└── common.sh
└── julia_install_wavi.jl

It contains common scripts used on all platforms, local/ scripts which contain the helper functions.

The BAS/ folder contains symlinks to the helper functions in local/, and additional BAS HPC-specific scripts.

The archer/ and jasmin/ folders contains symlinks to local/ and BAS/.

./

common.sh

Checks if Julia is available, and if we are running in the root directory.

julia_install_wavi.jl

Install WAVI into a Pkg environment. Also provides the option to install a development branch of WAVI.

local

Contains all functionality command scripts, which are described on the functionality page.

BAS

pre_run.sh

This is template script to demonstrate a pre-run task as part of an ensemble.

It sets environmental variables (such as run destination, outfiles names) used by a run.

post_batch.sh

This is template script to demonstrate a post-batch task as part of an ensemble.

It checks whether an outfile exists in the run directory.

install_julia.sh

A helper script that installs Julia, specifically written for use on Archer.

jasmin

Simply contains symlinks to all local scripts, and BAS HPCs pre_run.sh and post_batch.sh

archer

As with JASMIN, but with the addition of fcopy_wavi_case_a2.sh.

fcopy_wavi_case_a2.sh

An ARCHER2-specific script wich makes a new case by copying an old case on ARCHER2 without copying results files or unnecessary binaries.